Recent Publications

Peer-reviewed publications and book/chapters

2014 Publications

Journals Reference
PMID: 22444875;
PMCID: PMC3933949
Bonfield K, Amato E, Bankemper T, Agard H, Steller J, Keeler JM, Roy D, McCallum A, Paula S, Ma L. Development of a new class of aromatase inhibitors: design, synthesis and inhibitory activity of 3-phenylchroman-4-one (isoflavanone) derivatives. Bioorg Med Chem. 2012 Apr 15;20(8):2603-13.
PMID: 25077036;
PMCID: PMC4112473
Fardo DW, Charnigo R, Epstein MP. Families or Unrelated: The Evolving Debate in Genetic Association Studies. J Biom Biostat. 2012 Jun 1;3(4):e108.
PMID: 22967011;
PMCID: PMC3554462
Mohammad F, Flight RM, Harrison BJ, Petruska JC, Rouchka EC. AbsIDconvert: an absolute approach for converting genetic identifiers at different granularities. BMC Bioinformatics. 2012 Sep 12;13:229.
PMID: 25237209;
PMCID: PMC4165549
Carlson K. The Role of Only in Contrasts in and out of Context. Discourse Process. 2013;50(4):249-275.
PMID: 24098305;
PMCID: PMC3784826
Estus JL, Family Investigation of Nephropathy and Diabetes Research Group, Fardo DW. Combining genetic association study designs: a GWAS case study. Front Genet. 2013;4:186.
PMID: 22724427;
PMCID: PMC3459310
Marczinski CA, Fillmore MT, Henges AL, Ramsey MA, Young CR. Mixing an energy drink with an alcoholic beverage increases motivation for more alcohol in college students. Alcohol Clin Exp Res. 2013 Feb;37(2):276-83.
PMID: 23216417;
PMCID: PMC3610858
Marczinski CA, Stamates AL. Artificial sweeteners versus regular mixers increase breath alcohol concentrations in male and female social drinkers. Alcohol Clin Exp Res. 2013 Apr;37(4):696-702.
PMID: 23384094;
PMCID: PMC3618529
Marczinski CA, Fillmore MT. Letter to the editor in response to "The alcohol mixed with energy drinks debate: masking the facts!". Alcohol Clin Exp Res. 2013 Apr;37(4):706-8.
PMID: 23750695;
PMCID: PMC4041194
Bardgett ME, Franks-Henry JM, Colemire KR, Juneau KR, Stevens RM, Marczinski CA, Griffith MS. Adult rats treated with risperidone during development are hyperactive. Exp Clin Psychopharmacol. 2013 Jun;21(3):259-67.
PMID: 23643898;
PMCID: PMC3672395
Woeste M, Steller J, Hofmann E, Kidd T, Patel R, Connolly K, Jayasinghe M, Paula S. Structural requirements for inhibitory effects of bisphenols on the activity of the sarco/endoplasmic reticulum calcium ATPase. Bioorg Med Chem. 2013 Jul 1;21(13):3927-33.
PMID: 24416530;
PMCID: PMC3886832
Smith ME, Rajadinakaran G. The Transcriptomics to Proteomics of Hair Cell Regeneration: Looking for a Hair Cell in a Haystack. Microarrays (Basel). 2013 Jul 25;2(3).
PMID: 23946390;
PMCID: PMC3742922
Malik M, Simpson JF, Parikh I, Wilfred BR, Fardo DW, Nelson PT, Estus S. CD33 Alzheimer's risk-altering polymorphism, CD33 expression, and exon 2 splicing. J Neurosci. 2013 Aug 14;33(33):13320-5.
PMID: 24035030;
PMCID: PMC3836630
Miller J, Davis CD. Increasing frequency of feline cytauxzoonosis cases diagnosed in western Kentucky from 2001 to 2011. Vet Parasitol. 2013 Nov 15;198(1-2):205-8.
PMID: 24267470;
PMCID: PMC3907027
Heron PM, Stromberg AJ, Breheny P, McClintock TS. Molecular events in the cell types of the olfactory epithelium during adult neurogenesis. Mol Brain. 2013 Nov 22;6:49.
PMID: 24141082;
PMCID: PMC3863933
Vasquez JB, Fardo DW, Estus S. ABCA7 expression is associated with Alzheimer's disease polymorphism and disease status. Neurosci Lett. 2013 Nov 27;556:58-62.
PMID: 25632406;
PMCID: PMC4306332
Eteleeb AM, Flight RM, Harrison BJ, Petruska JC, Rouchka EC. An Island-Based Approach for Differential Expression Analysis. ACM Conf Bioinform Comput Biol Biomed Inform (2013). 2013 Dec 31;2013:419-429.
PMID: 24345481;
PMCID: PMC3933948
Amato E, Bankemper T, Kidney R, Do T, Onate A, Thowfeik FS, Merino EJ, Paula S, Ma L. Investigation of fluorinated and bifunctionalized 3-phenylchroman-4-one (isoflavanone) aromatase inhibitors. Bioorg Med Chem. 2014 Jan 1;22(1):126-34.
PMID: 24049153;
PMCID: PMC3865814
Downer B, Zanjani F, Fardo DW. The relationship between midlife and late life alcohol consumption, APOE e 4 and the decline in learning and memory among older adults. Alcohol Alcohol. 2014 Jan-Feb;49(1):17-22.
PMID: 24729648;
PMCID: PMC3979625
Frazier L, Clifton C Jr, Carlson K, Harris JA. Standing alone with prosodic help. Lang Cogn Process. 2014 Jan 1;29(4):459-469. PubMed PMID: 24729648; PMCID: PMC3979625.
PMID: 24361506; PMCID: PMC3938392Forbes-Stovall J, Howton J, Young M, Davis G, Chandler T, Kessler B, Rinehart CA, Jacobshagen S. Chlamydomonas reinhardtii strain CC-124 is highly sensitive to blue light in addition to green and red light in resetting its circadian clock, with the blue-light photoreceptor plant cryptochrome likely acting as negative modulator. Plant Physiol Biochem. 2014 Feb;75:14-23.
PMID: 23817991; PMCID: PMC3855891Harrison BJ, Flight RM, Gomes C, Venkat G, Ellis SR, Sankar U, Twiss JL, Rouchka EC, Petruska JC. IB4-binding sensory neurons in the adult rat express a novel 3' UTR- extended isoform of CaMK4 that is associated with its localization to axons. J Comp Neurol. 2014 Feb 1;522(2):308-36.
PMID: 24304139; PMCID: PMC3951170Gonzalez OA, Novak MJ, Kirakodu S, Orraca L, Chen KC, Stromberg A, Gonzalez- Martinez J, Ebersole JL. Comparative analysis of gingival tissue antigen presentation pathways in ageing and periodontitis. J Clin Periodontol. 2014 Apr;41(4):327-39.
PMID: 24747970; PMCID: PMC4205225Shah PP, Lockwood WW, Saurabh K, Kurlawala Z, Shannon SP, Waigel S, Zacharias W, Beverly LJ. Ubiquilin1 represses migration and epithelial-to-mesenchymal transition of human non-small cell lung cancer cells. Oncogene. 2014 Apr 21;
PMID: 25054080; PMCID: PMC4103199.Marczinski CA, Stamates AL, Ossege J, Maloney SF, Bardgett ME, Brown CJ. Subjective State, Blood Pressure, and Behavioral Control Changes Produced by an "Energy Shot". J Caffeine Res. 2014 Jun 1;4(2):57-63. PubMed
PubMed PMID: 25293549; PMCID: PMC4190582.Marczinski CA, Fillmore MT. Energy drinks mixed with alcohol: what are the risks?. Nutr Rev. 2014 Oct;72 Suppl 1:98-107.
PubMed PMID: 25554683; NIHMSID: 663852Kelley RR, Mattingly WA, Wiemken TL, Khan M, Coats D, Curran D, Chariker JH, Ramirez J. Visual grids for managing data completeness in clinical research datasets. J Biomed Inform. 2014 Dec 30;
NIHMSID: 639425A comparison of combined p-value methods for gene differential expression using RNA- seq data. Proceedings of the 5th ACM Conference on Bioinformatics, Computational Biology, and Health Informatics.
NIHMSID: 650555A tale of two haplotype groups: Evaluating the New World Junonia ring species hypothesis using the distribution of divergent COI haplotypes. Systematic entomology.
NIHMSID: 666695Regulation of a serine protease homolog by the JNK pathway during thoracic development of Drosophila melanogaster. FEBS open bio.
NIHMSID: 158282The Novel Distribution of Phosphodiesterase-4 Subtypes within the Rat Retina. Neuroscience.
NIHMSID: 275500Individual microRNAs (miRNAs) display distinct mRNA targeting "rules". RNA biology.