Valdes Lab - Resources

SELDI Biomarker Discovery and Utilization

Background:

The ProteinChip® System from Ciphergen Biosystems (Fremont, CA) uses patented SELDI (Surface-Enhanced Laser Desorption/Ionization) ProteinChip technology to rapidly perform the separation, detection, and analysis of proteins at the femtomole quantities using biological samples directly without the need for pre-analytical extractions or sample-preparation procedures. The system allows for analyte capture, purification, analysis, and processing from complex biological mixtures directly on ProteinChip Array surfaces. The signal amplification produced by the protein capture and micropurification is analogous to searching for “a needle in a haystack” by capturing the needles and washing away the hay. Detection of the purified proteins is performed by Laser Desorption / Ionization Time-of-Flight mass analysis. Chemical and biochemical processing can be included at any step throughout the SELDI process to greatly enhance the detailed knowledge gained from a set of experiments.

Data analysis:

There are various ways of generating and representing data.

Data can be presented in a typical mass-spectrum. Several patients or controls can be analyzed in mass-spectrometric or gel-view formats:

Availability:

The SELDI facility is available in the Diagnostic Reference Laboratory. Utilization by other researchers in our institution will be made available by various collaborative arrangements. Please contact Dr. Valdes or Dr. Jortani for more details.

 

Contact:

 

Rosemary Williams

Administrative Assistant

 

MDR Bldg., Rm 208

511 S. Floyd St.

Louisville, KY 40292

 

Email: rjwill01@gwise.louisville.edu

 

Availability:

 

The SELDI facility is available in the Diagnostic Reference Laboratory.

 

Please contact Dr. Valdes or Dr. Jortani for more details.

Diagnostic Reference Lab Pharmacogenetics Diagnostic Lab DLIF Research Lab Clin Chem Fellowship Valdes Laboratories University of Louisville